Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 DUX4L16-201ENST00000555130 1264 ntBASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 AC145098.2-201ENST00000623593 3026 ntBASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
CHKB-CPT1BH3BT56 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CHKB-CPT1BH3BT56 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 KRT8P47-201ENST00000604727 1398 ntBASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 AC008555.2-202ENST00000601776 5302 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 PHB2-213ENST00000546111 858 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 AC092118.2-201ENST00000613495 667 ntBASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 AC011298.2-201ENST00000617989 482 ntBASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 AL445675.2-201ENST00000620291 557 ntBASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 KLHL15-201ENST00000328046 6272 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 NPTN-IT1-201ENST00000628401 2283 ntBASIC8.64□□□□□ -1.03
CHKB-CPT1BH3BT56 AC020658.6-201ENST00000623564 1870 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms