Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 PCGF3-213ENST00000620529 1899 ntBASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 RPS2P32-201ENST00000439199 892 ntBASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 RN7SL837P-201ENST00000463010 287 ntBASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 ELK1P1-201ENST00000485699 580 ntBASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC015936.2-201ENST00000593177 259 ntBASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 MIR6799-201ENST00000620297 69 ntBASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC106881.1-201ENST00000605849 3329 ntBASIC15.42■□□□□ 0.06
TMX2-CTNND1H3BSU7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 BOLA2P3-201ENST00000404566 256 ntBASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 WASH4P-201ENST00000564273 1246 ntBASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMX2-CTNND1H3BSU7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC005622.1-201ENST00000636801 1703 ntBASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 ME2P1-201ENST00000426028 1970 ntBASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TMX2-CTNND1H3BSU7 CICP24-201ENST00000605464 2705 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms