Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM235A6NFC5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 CICP14-201ENST00000629111 2732 ntBASIC13.42□□□□□ -0.26
TMEM235A6NFC5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 HCG4B-203ENST00000450128 991 ntBASIC13.42□□□□□ -0.26
TMEM235A6NFC5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 AC096734.2-201ENST00000562054 433 ntBASIC13.42□□□□□ -0.26
TMEM235A6NFC5 AC061975.2-201ENST00000581722 295 ntBASIC13.42□□□□□ -0.26
TMEM235A6NFC5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 AC023141.13-201ENST00000604991 943 ntBASIC13.42□□□□□ -0.26
TMEM235A6NFC5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 FAM215A-202ENST00000632077 792 ntBASIC13.42□□□□□ -0.26
TMEM235A6NFC5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.42□□□□□ -0.26
TMEM235A6NFC5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TMEM235A6NFC5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 RHOQP3-201ENST00000437982 621 ntBASIC13.41□□□□□ -0.26
TMEM235A6NFC5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 AC012313.10-201ENST00000623509 926 ntBASIC13.41□□□□□ -0.26
TMEM235A6NFC5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 AC007064.4-201ENST00000637740 555 ntBASIC13.41□□□□□ -0.26
TMEM235A6NFC5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TMEM235A6NFC5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms