Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L3A6NE82 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AL158070.2-201ENST00000623713 1621 ntBASIC13.62□□□□□ -0.23
MBD3L3A6NE82 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 BRWD1P1-201ENST00000401091 371 ntBASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 MIR4525-201ENST00000580000 75 ntBASIC13.62□□□□□ -0.23
MBD3L3A6NE82 RN7SL219P-201ENST00000582872 296 ntBASIC13.62□□□□□ -0.23
MBD3L3A6NE82 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AC006453.4-201ENST00000636949 1252 ntBASIC13.62□□□□□ -0.23
MBD3L3A6NE82 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 LRRC59-203ENST00000576448 1531 ntBASIC13.62□□□□□ -0.23
MBD3L3A6NE82 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AHCYP2-201ENST00000430630 1300 ntBASIC13.62□□□□□ -0.23
MBD3L3A6NE82 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L3A6NE82 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 AC092127.1-201ENST00000567093 3455 ntBASIC13.61□□□□□ -0.23
MBD3L3A6NE82 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 AC022494.1-201ENST00000466044 728 ntBASIC13.61□□□□□ -0.23
MBD3L3A6NE82 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.61□□□□□ -0.23
MBD3L3A6NE82 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
MBD3L3A6NE82 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms