Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 AL359258.3-201ENST00000622910 2331 ntBASIC19.27■□□□□ 0.68
LAMB4A4D0S4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMB4A4D0S4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 TMBIM7P-203ENST00000641617 1718 ntBASIC19.27■□□□□ 0.67
LAMB4A4D0S4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 AC016700.1-201ENST00000429424 312 ntBASIC19.27■□□□□ 0.67
LAMB4A4D0S4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 AP001258.2-201ENST00000529891 490 ntBASIC19.27■□□□□ 0.67
LAMB4A4D0S4 RHOQP1-201ENST00000555758 579 ntBASIC19.27■□□□□ 0.67
LAMB4A4D0S4 CHMP4BP1-201ENST00000556017 588 ntBASIC19.27■□□□□ 0.67
LAMB4A4D0S4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
LAMB4A4D0S4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 AL645939.5-201ENST00000606834 243 ntBASIC19.26■□□□□ 0.67
LAMB4A4D0S4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.26■□□□□ 0.67
LAMB4A4D0S4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 AC023024.2-201ENST00000623561 1993 ntBASIC19.25■□□□□ 0.67
LAMB4A4D0S4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 NKAIN1P1-201ENST00000435754 582 ntBASIC19.25■□□□□ 0.67
LAMB4A4D0S4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 INE2-201ENST00000630399 1874 ntBASIC19.25■□□□□ 0.67
LAMB4A4D0S4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 AC126365.1-201ENST00000578585 1514 ntBASIC19.25■□□□□ 0.67
LAMB4A4D0S4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMB4A4D0S4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMB4A4D0S4 PCDHA1-201ENST00000378133 2726 ntBASIC19.24■□□□□ 0.67
LAMB4A4D0S4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.24■□□□□ 0.67
LAMB4A4D0S4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMB4A4D0S4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMB4A4D0S4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms