Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC66A2RUB6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 DGCR9-201ENST00000609630 2415 ntBASIC17.06■□□□□ 0.32
CCDC66A2RUB6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 AL031284.1-201ENST00000419297 478 ntBASIC17.06■□□□□ 0.32
CCDC66A2RUB6 AC009947.1-201ENST00000444350 727 ntBASIC17.06■□□□□ 0.32
CCDC66A2RUB6 HCG4B-203ENST00000450128 991 ntBASIC17.06■□□□□ 0.32
CCDC66A2RUB6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.06■□□□□ 0.32
CCDC66A2RUB6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 UNC93B6-202ENST00000528242 690 ntBASIC17.06■□□□□ 0.32
CCDC66A2RUB6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 AC096734.2-201ENST00000562054 433 ntBASIC17.06■□□□□ 0.32
CCDC66A2RUB6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC66A2RUB6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 RHOQP3-201ENST00000437982 621 ntBASIC17.05■□□□□ 0.32
CCDC66A2RUB6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 AL049840.3-201ENST00000602669 611 ntBASIC17.05■□□□□ 0.32
CCDC66A2RUB6 AL078644.1-201ENST00000609881 752 ntBASIC17.05■□□□□ 0.32
CCDC66A2RUB6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 AC013726.1-201ENST00000563747 2285 ntBASIC17.05■□□□□ 0.32
CCDC66A2RUB6 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.05■□□□□ 0.32
CCDC66A2RUB6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 AL731571.1-201ENST00000617058 5428 ntBASIC17.05■□□□□ 0.32
CCDC66A2RUB6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC66A2RUB6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms