Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
PCDHB1Q9Y5F3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.64■□□□□ 0.1
PCDHB1Q9Y5F3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 SLC7A15P-201ENST00000424028 1363 ntBASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 RN7SL837P-201ENST00000463010 287 ntBASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 AL033527.5-202ENST00000641632 1098 ntBASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHB1Q9Y5F3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AC126177.1-201ENST00000547829 2218 ntBASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 TTTY23B-201ENST00000442790 549 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms