Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 AC055717.3-201ENST00000622967 595 ntBASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 KRT8P44-201ENST00000441609 1350 ntBASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 AC018892.3-201ENST00000623986 2499 ntBASIC13.78□□□□□ -0.2
RHBDD3Q9Y3P4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RHBDD3Q9Y3P4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.77□□□□□ -0.2
RHBDD3Q9Y3P4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RHBDD3Q9Y3P4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
RHBDD3Q9Y3P4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 AC004987.2-201ENST00000395959 1148 ntBASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 RPS8P6-201ENST00000426177 609 ntBASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 FAM58DP-201ENST00000428076 619 ntBASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 AC093520.2-201ENST00000561830 333 ntBASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 MIR4313-201ENST00000580760 101 ntBASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
RHBDD3Q9Y3P4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 AL627223.1-201ENST00000416693 442 ntBASIC13.76□□□□□ -0.21
RHBDD3Q9Y3P4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms