Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 TARDBPP1-201ENST00000442013 1203 ntBASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 AC015936.2-201ENST00000593177 259 ntBASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 AC036164.1-201ENST00000570544 333 ntBASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HDAC6Q9UBN7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 AC112504.1-201ENST00000623415 1841 ntBASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 COX11-210ENST00000639671 696 ntBASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 LINC02228-204ENST00000642115 2962 ntBASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms