Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 FGFR3P1-201ENST00000449999 601 ntBASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 CEP164P1-201ENST00000455142 418 ntBASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 AC106794.1-201ENST00000506935 792 ntBASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 AC011491.1-203ENST00000637688 543 ntBASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 AC011477.6-201ENST00000604980 1927 ntBASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.56■□□□□ 0.24
CXXC1Q9P0U4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 AC103988.2-201ENST00000561804 725 ntBASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 AC020922.3-201ENST00000595064 547 ntBASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 RN7SL736P-201ENST00000613111 269 ntBASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 AL353770.1-201ENST00000614915 403 ntBASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 AC004899.1-201ENST00000424687 1714 ntBASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXXC1Q9P0U4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 AC006449.6-201ENST00000612330 2296 ntBASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 RN7SL163P-201ENST00000583100 276 ntBASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXXC1Q9P0U4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms