Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 AC084364.1-201ENST00000551967 1556 ntBASIC14.82□□□□□ -0.04
VAPAQ9P0L0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 SLC25A39P2-201ENST00000537614 270 ntBASIC14.82□□□□□ -0.04
VAPAQ9P0L0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 AC106730.1-201ENST00000566722 1090 ntBASIC14.82□□□□□ -0.04
VAPAQ9P0L0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 AC084121.4-201ENST00000641598 221 ntBASIC14.82□□□□□ -0.04
VAPAQ9P0L0 AF228730.8-201ENST00000642140 221 ntBASIC14.82□□□□□ -0.04
VAPAQ9P0L0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 ACE3P-201ENST00000423435 1973 ntBASIC14.82□□□□□ -0.04
VAPAQ9P0L0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.82□□□□□ -0.04
VAPAQ9P0L0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 AC139749.1-202ENST00000617529 3139 ntBASIC14.81□□□□□ -0.04
VAPAQ9P0L0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 AC140479.7-201ENST00000636301 2332 ntBASIC14.81□□□□□ -0.04
VAPAQ9P0L0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 RPL5P21-201ENST00000404620 815 ntBASIC14.81□□□□□ -0.04
VAPAQ9P0L0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 AC023274.1-201ENST00000418278 595 ntBASIC14.81□□□□□ -0.04
VAPAQ9P0L0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.81□□□□□ -0.04
VAPAQ9P0L0 RARRES2P9-201ENST00000565168 469 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms