Protein–RNA interactions for Protein: Q9NS71

GKN1, Gastrokine-1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1Q9NS71 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 AC026691.1-201ENST00000602502 2017 ntBASIC16.16■□□□□ 0.18
GKN1Q9NS71 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 AC016694.1-201ENST00000434179 700 ntBASIC16.16■□□□□ 0.18
GKN1Q9NS71 FO681548.1-201ENST00000455617 1132 ntBASIC16.16■□□□□ 0.18
GKN1Q9NS71 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 FTH1P14-201ENST00000482930 551 ntBASIC16.16■□□□□ 0.18
GKN1Q9NS71 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 MIR4525-201ENST00000580000 75 ntBASIC16.16■□□□□ 0.18
GKN1Q9NS71 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 AC107373.2-201ENST00000607735 490 ntBASIC16.16■□□□□ 0.18
GKN1Q9NS71 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.16■□□□□ 0.18
GKN1Q9NS71 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GKN1Q9NS71 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 HYMAI-201ENST00000635591 3347 ntBASIC16.15■□□□□ 0.18
GKN1Q9NS71 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 MIR1908-201ENST00000410394 80 ntBASIC16.15■□□□□ 0.18
GKN1Q9NS71 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 RNA5SP412-201ENST00000516234 123 ntBASIC16.15■□□□□ 0.18
GKN1Q9NS71 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 FAM8A2P-201ENST00000528813 1142 ntBASIC16.15■□□□□ 0.18
GKN1Q9NS71 AP000812.2-201ENST00000538934 718 ntBASIC16.15■□□□□ 0.18
GKN1Q9NS71 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
GKN1Q9NS71 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GKN1Q9NS71 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
GKN1Q9NS71 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
GKN1Q9NS71 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
GKN1Q9NS71 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GKN1Q9NS71 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GKN1Q9NS71 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GKN1Q9NS71 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
GKN1Q9NS71 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
GKN1Q9NS71 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.14■□□□□ 0.17
GKN1Q9NS71 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GKN1Q9NS71 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.14■□□□□ 0.17
GKN1Q9NS71 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms