Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDLIM7Q9NR12 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 MIR4722-201ENST00000578292 60 ntBASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AC127383.1-201ENST00000444697 1800 ntBASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDLIM7Q9NR12 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 HOMER2P2-201ENST00000451621 847 ntBASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 GAPDHP40-201ENST00000505218 1006 ntBASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 MIR4706-201ENST00000582134 82 ntBASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 EEF1DP1-201ENST00000585891 896 ntBASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 KRT8P19-201ENST00000551916 1455 ntBASIC17.31■□□□□ 0.36
PDLIM7Q9NR12 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 DRD5P1-201ENST00000456605 1438 ntBASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM7Q9NR12 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms