Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 ACKR1-201ENST00000368121 1240 ntBASIC16.8■□□□□ 0.28
NXF3Q9H4D5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 AL365203.3-201ENST00000609742 2057 ntBASIC16.79■□□□□ 0.28
NXF3Q9H4D5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 AC007551.1-201ENST00000457394 519 ntBASIC16.79■□□□□ 0.28
NXF3Q9H4D5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NXF3Q9H4D5 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 AC099336.1-201ENST00000417053 1171 ntBASIC16.78■□□□□ 0.28
NXF3Q9H4D5 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.78■□□□□ 0.28
NXF3Q9H4D5 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms