Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BHLHE41Q9C0J9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 MTND6P24-201ENST00000440466 518 ntBASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 AL161772.1-201ENST00000610494 4412 ntBASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 AC084364.1-201ENST00000551967 1556 ntBASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
BHLHE41Q9C0J9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 LINC01101-201ENST00000622953 1884 ntBASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 RPSAP43-201ENST00000402237 625 ntBASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 SPDYE7P-202ENST00000420373 878 ntBASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 TARDBPP1-201ENST00000442013 1203 ntBASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 AC112482.1-201ENST00000492080 688 ntBASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 AC010327.4-202ENST00000591484 748 ntBASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms