Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 AC097724.1-201ENST00000609581 426 ntBASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 AC100850.1-201ENST00000506768 649 ntBASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PCDH11YQ9BZA8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 AC127383.1-201ENST00000444697 1800 ntBASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 AC055811.4-201ENST00000624039 1754 ntBASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 AC245884.6-201ENST00000515672 1067 ntBASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 AC022217.1-201ENST00000521069 738 ntBASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 AC138466.3-201ENST00000619983 221 ntBASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 CU633904.3-201ENST00000624042 1029 ntBASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH11YQ9BZA8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 AL662844.4-201ENST00000606367 2838 ntBASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 AC112504.1-201ENST00000623415 1841 ntBASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH11YQ9BZA8 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms