Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 MIR4706-201ENST00000582134 82 ntBASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 AL354877.1-201ENST00000424412 413 ntBASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 AC005730.2-201ENST00000564549 1184 ntBASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 AP001505.2-201ENST00000616815 443 ntBASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 AL645728.2-202ENST00000641679 227 ntBASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTFDC1Q9BY42 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 AC090340.1-201ENST00000620778 4980 ntBASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 MIR769-201ENST00000390225 118 ntBASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 AL008707.1-201ENST00000422498 534 ntBASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 RN7SL720P-201ENST00000488178 304 ntBASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 OR10B1P-201ENST00000601666 907 ntBASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 AL645939.5-201ENST00000606834 243 ntBASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 AC022748.3-201ENST00000621828 275 ntBASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 CU633904.3-201ENST00000624042 1029 ntBASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 AL603764.1-201ENST00000636452 321 ntBASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTFDC1Q9BY42 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms