Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 AC090616.6-203ENST00000579186 1945 ntBASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 AC018665.1-201ENST00000622927 1362 ntBASIC18.92■□□□□ 0.62
RPAP1Q9BWH6 AC092127.1-201ENST00000567093 3455 ntBASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 TMBIM7P-203ENST00000641617 1718 ntBASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 TOMM22P5-201ENST00000416399 439 ntBASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 SLED1-202ENST00000512051 380 ntBASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 AC104989.1-201ENST00000519711 778 ntBASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 BTNL10-201ENST00000595971 695 ntBASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.91■□□□□ 0.62
RPAP1Q9BWH6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 AP003680.1-201ENST00000598970 3660 ntBASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.9■□□□□ 0.62
RPAP1Q9BWH6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms