Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AP002414.3-201ENST00000589352 1468 ntBASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 LINC00982-205ENST00000420957 435 ntBASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 AC140113.2-201ENST00000604370 208 ntBASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 AL928921.2-201ENST00000641325 2442 ntBASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NDUFAF3Q9BU61 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 AC138969.2-201ENST00000532739 9932 ntBASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 KRT18P3-201ENST00000451602 1288 ntBASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 UNC93B6-202ENST00000528242 690 ntBASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NDUFAF3Q9BU61 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms