Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 SLC25A39P2-201ENST00000537614 270 ntBASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 AP000842.3-202ENST00000569238 1080 ntBASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 AC005252.3-201ENST00000623855 2258 ntBASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TUBA1CQ9BQE3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AC008677.1-201ENST00000519230 1561 ntBASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AC112693.3-201ENST00000624819 1983 ntBASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 Z92544.3-201ENST00000624747 417 ntBASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AC084121.4-201ENST00000641598 221 ntBASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AF228730.8-201ENST00000642140 221 ntBASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AC090616.6-203ENST00000579186 1945 ntBASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 AC091951.1-201ENST00000512854 2465 ntBASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 FGD5P1-202ENST00000614866 2498 ntBASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TUBA1CQ9BQE3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms