Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AC007686.3-201ENST00000619017 3487 ntBASIC11.95□□□□□ -0.5
VGLL1Q99990 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.94□□□□□ -0.5
VGLL1Q99990 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.94□□□□□ -0.5
VGLL1Q99990 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
VGLL1Q99990 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 KRT8P44-201ENST00000441609 1350 ntBASIC11.94□□□□□ -0.5
VGLL1Q99990 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.94□□□□□ -0.5
VGLL1Q99990 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.94□□□□□ -0.5
VGLL1Q99990 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
VGLL1Q99990 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.94□□□□□ -0.5
VGLL1Q99990 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
VGLL1Q99990 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
VGLL1Q99990 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
VGLL1Q99990 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.94□□□□□ -0.5
VGLL1Q99990 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.94□□□□□ -0.5
VGLL1Q99990 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.94□□□□□ -0.5
VGLL1Q99990 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.94□□□□□ -0.5
VGLL1Q99990 AC034105.1-201ENST00000563488 319 ntBASIC11.94□□□□□ -0.5
VGLL1Q99990 SLC25A6P4-201ENST00000586535 553 ntBASIC11.94□□□□□ -0.5
VGLL1Q99990 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.94□□□□□ -0.5
VGLL1Q99990 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.94□□□□□ -0.5
VGLL1Q99990 FOXO1B-201ENST00000504678 1527 ntBASIC11.94□□□□□ -0.5
VGLL1Q99990 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
VGLL1Q99990 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
VGLL1Q99990 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
VGLL1Q99990 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.94□□□□□ -0.5
VGLL1Q99990 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 CICP23-201ENST00000605013 2741 ntBASIC11.94□□□□□ -0.5
VGLL1Q99990 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VGLL1Q99990 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
VGLL1Q99990 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
VGLL1Q99990 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
VGLL1Q99990 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
VGLL1Q99990 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 HLA-A-201ENST00000376802 1334 ntBASIC11.93□□□□□ -0.5
VGLL1Q99990 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.93□□□□□ -0.5
VGLL1Q99990 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.93□□□□□ -0.5
VGLL1Q99990 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 AC004987.2-201ENST00000395959 1148 ntBASIC11.93□□□□□ -0.5
VGLL1Q99990 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.93□□□□□ -0.5
VGLL1Q99990 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.93□□□□□ -0.5
VGLL1Q99990 AC105233.2-201ENST00000523697 349 ntBASIC11.93□□□□□ -0.5
VGLL1Q99990 AF228730.5-201ENST00000530288 346 ntBASIC11.93□□□□□ -0.5
VGLL1Q99990 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 RARRES2P8-201ENST00000566335 367 ntBASIC11.93□□□□□ -0.5
VGLL1Q99990 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VGLL1Q99990 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.93□□□□□ -0.5
VGLL1Q99990 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.93□□□□□ -0.5
VGLL1Q99990 AC099522.2-201ENST00000607001 744 ntBASIC11.93□□□□□ -0.5
VGLL1Q99990 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
VGLL1Q99990 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.93□□□□□ -0.5
VGLL1Q99990 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.93□□□□□ -0.5
VGLL1Q99990 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
VGLL1Q99990 AC097376.2-205ENST00000610159 5334 ntBASIC11.93□□□□□ -0.5
VGLL1Q99990 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms