Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AC136621.1-201ENST00000624017 2304 ntBASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AC100850.1-201ENST00000506768 649 ntBASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AC023024.2-201ENST00000623561 1993 ntBASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 REXO1L5P-201ENST00000622260 2098 ntBASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 AIRN-201ENST00000601203 4374 ntBASIC18.04■□□□□ 0.48
CDK5RAP2Q96SN8 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 BTBD6P1-201ENST00000412176 1267 ntBASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 Z93015.1-201ENST00000451718 390 ntBASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 AL591846.1-201ENST00000451736 433 ntBASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 C18orf15-201ENST00000623680 2534 ntBASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 AC013355.1-201ENST00000562625 723 ntBASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 MIR4683-201ENST00000579659 81 ntBASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 OR10B1P-201ENST00000601666 907 ntBASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 AL358472.3-201ENST00000608147 415 ntBASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDK5RAP2Q96SN8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 AHCYP2-201ENST00000430630 1300 ntBASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDK5RAP2Q96SN8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms