Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 METTL21AP1-201ENST00000438852 635 ntBASIC14.35□□□□□ -0.11
SNX18Q96RF0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 RN7SL589P-201ENST00000481268 310 ntBASIC14.35□□□□□ -0.11
SNX18Q96RF0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 ELL2P1-201ENST00000413990 1906 ntBASIC14.35□□□□□ -0.11
SNX18Q96RF0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 AC107918.4-201ENST00000641966 3141 ntBASIC14.34□□□□□ -0.11
SNX18Q96RF0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 FAM220BP-201ENST00000377689 816 ntBASIC14.34□□□□□ -0.11
SNX18Q96RF0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 AL355306.1-201ENST00000415580 579 ntBASIC14.34□□□□□ -0.11
SNX18Q96RF0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 CNN2P11-201ENST00000429351 262 ntBASIC14.34□□□□□ -0.11
SNX18Q96RF0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 FAM58CP-201ENST00000435741 640 ntBASIC14.34□□□□□ -0.11
SNX18Q96RF0 MKNK2P1-201ENST00000437526 628 ntBASIC14.34□□□□□ -0.11
SNX18Q96RF0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 AL355385.1-201ENST00000606123 409 ntBASIC14.34□□□□□ -0.11
SNX18Q96RF0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX18Q96RF0 FOXO1B-201ENST00000504678 1527 ntBASIC14.34□□□□□ -0.11
SNX18Q96RF0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNX18Q96RF0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms