Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2E2Q96LR5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2E2Q96LR5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2E2Q96LR5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.13□□□□□ -0.47
UBE2E2Q96LR5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
UBE2E2Q96LR5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2E2Q96LR5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 COX5BP8-201ENST00000416911 349 ntBASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 KRT17P7-201ENST00000451704 1104 ntBASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 BRI3BPP1-201ENST00000594224 787 ntBASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 AC133539.2-201ENST00000604757 467 ntBASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2E2Q96LR5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC098850.1-201ENST00000419919 790 ntBASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC134915.1-201ENST00000426461 574 ntBASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 CTBP2P3-201ENST00000585629 1255 ntBASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.11□□□□□ -0.47
UBE2E2Q96LR5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms