Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC005225.4-201ENST00000557330 545 ntBASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 TSPY26P-202ENST00000565928 3884 ntBASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 LINC02447-202ENST00000501888 2146 ntBASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 CDC14C-201ENST00000428251 1719 ntBASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 AL136982.4-201ENST00000437689 1740 ntBASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 AC134407.2-201ENST00000625089 1978 ntBASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 MYO15B-237ENST00000642007 4893 ntBASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SH3KBP1Q96B97 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 PRAL-201ENST00000624952 3286 ntBASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 TIMM17BP1-201ENST00000545713 516 ntBASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.56■□□□□ 0.08
SH3KBP1Q96B97 AC104794.3-201ENST00000566840 1248 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms