Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 GEMIN8P4-201ENST00000380526 729 ntBASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 HNRNPA1P72-201ENST00000529511 967 ntBASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AC093525.9-201ENST00000624961 1746 ntBASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 KRT8P31-201ENST00000504812 1408 ntBASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AC069421.1-201ENST00000447462 323 ntBASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 RN7SL480P-201ENST00000581481 294 ntBASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 FTX-216ENST00000638985 1367 ntTSL 5 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 HLA-A-202ENST00000376806 1854 ntBASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 GUSBP10-201ENST00000417412 665 ntBASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 AC069366.2-201ENST00000583643 430 ntBASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 KRT18P40-201ENST00000599859 1571 ntBASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SYNE2Q8WXH0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 AC025594.1-201ENST00000469533 543 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 RPL10P8-201ENST00000522888 313 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 MIR2392-201ENST00000584881 84 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 FAM223B-202ENST00000598177 713 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 FAM223A-202ENST00000625204 713 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 GGT3P-204ENST00000453783 1664 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 CHCHD2P6-201ENST00000454346 447 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 FTH1P22-201ENST00000456305 520 ntBASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 PMM2-216ENST00000569958 698 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC6.09□□□□□ -1.43
SYNE2Q8WXH0 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms