Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 MRPL3P1-201ENST00000400109 1033 ntBASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 AC108073.2-201ENST00000464002 357 ntBASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 AL049840.3-201ENST00000602669 611 ntBASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 AL356488.2-201ENST00000602755 427 ntBASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 AC104692.2-201ENST00000603054 253 ntBASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 AL078644.1-201ENST00000609881 752 ntBASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 SBF1P1-201ENST00000444527 5631 ntBASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 REXO1L1P-202ENST00000608646 1974 ntBASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFWD2Q8NHY2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 AL031284.1-201ENST00000419297 478 ntBASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 AL513480.1-201ENST00000451731 511 ntBASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 CXCL1P1-201ENST00000502804 216 ntBASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 AC005593.1-201ENST00000624894 515 ntBASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 FAM215A-202ENST00000632077 792 ntBASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 AL645728.2-201ENST00000641974 660 ntBASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 OR2I1P-210ENST00000642037 4691 ntBASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.54■□□□□ 0.08
RFWD2Q8NHY2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.53■□□□□ 0.08
RFWD2Q8NHY2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms