Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC105339.1-204ENST00000636249 355 ntBASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 KRT18P32-201ENST00000424695 1287 ntBASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 EEF1DP4-201ENST00000446006 880 ntBASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AC097359.3-201ENST00000603982 1210 ntBASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AC084121.4-201ENST00000641598 221 ntBASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AF228730.8-201ENST00000642140 221 ntBASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AL607033.1-201ENST00000623900 1599 ntBASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 AC023024.2-201ENST00000623561 1993 ntBASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 KRT8P44-201ENST00000441609 1350 ntBASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLHC1Q8NHS4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLHC1Q8NHS4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CLHC1Q8NHS4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLHC1Q8NHS4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLHC1Q8NHS4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
CLHC1Q8NHS4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 AP000347.1-202ENST00000435868 847 ntBASIC15.08■□□□□ 0
CLHC1Q8NHS4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 ALG1L8P-201ENST00000533887 760 ntBASIC15.08■□□□□ 0
CLHC1Q8NHS4 BANF1P1-201ENST00000553684 263 ntBASIC15.08■□□□□ 0
CLHC1Q8NHS4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 MIR4469-201ENST00000583919 79 ntBASIC15.08■□□□□ 0
CLHC1Q8NHS4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms