Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 PIN4P1-201ENST00000451079 396 ntBASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 DGAT2L7P-201ENST00000602462 744 ntBASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 AC103691.2-201ENST00000618824 433 ntBASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 AC008764.6-201ENST00000595909 2069 ntBASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 AC116345.2-201ENST00000512837 523 ntBASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 AC242376.1-201ENST00000559033 726 ntBASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCDC168Q8NDH2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 RNF216P1-203ENST00000404404 2427 ntBASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 RTN3P1-201ENST00000536295 711 ntBASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms