Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
APLFQ8IW19 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.64■□□□□ 0.09
APLFQ8IW19 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
APLFQ8IW19 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.64■□□□□ 0.09
APLFQ8IW19 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
APLFQ8IW19 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.64■□□□□ 0.09
APLFQ8IW19 CDC14C-201ENST00000428251 1719 ntBASIC15.64■□□□□ 0.09
APLFQ8IW19 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.64■□□□□ 0.09
APLFQ8IW19 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.64■□□□□ 0.09
APLFQ8IW19 AC002472.2-201ENST00000442739 958 ntBASIC15.64■□□□□ 0.09
APLFQ8IW19 TSPY16P-201ENST00000449843 468 ntBASIC15.64■□□□□ 0.09
APLFQ8IW19 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.64■□□□□ 0.09
APLFQ8IW19 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.64■□□□□ 0.09
APLFQ8IW19 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.64■□□□□ 0.09
APLFQ8IW19 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.64■□□□□ 0.09
APLFQ8IW19 AC026150.2-201ENST00000564693 1156 ntBASIC15.64■□□□□ 0.09
APLFQ8IW19 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.64■□□□□ 0.09
APLFQ8IW19 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 AL158211.3-201ENST00000607385 239 ntBASIC15.64■□□□□ 0.09
APLFQ8IW19 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
APLFQ8IW19 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.64■□□□□ 0.09
APLFQ8IW19 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.64■□□□□ 0.09
APLFQ8IW19 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
APLFQ8IW19 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
APLFQ8IW19 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 UXT-AS1-201ENST00000590504 1525 ntBASIC15.63■□□□□ 0.09
APLFQ8IW19 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
APLFQ8IW19 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.63■□□□□ 0.09
APLFQ8IW19 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 WASH6P-202ENST00000359512 1437 ntBASIC15.63■□□□□ 0.09
APLFQ8IW19 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.63■□□□□ 0.09
APLFQ8IW19 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.63■□□□□ 0.09
APLFQ8IW19 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.63■□□□□ 0.09
APLFQ8IW19 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.63■□□□□ 0.09
APLFQ8IW19 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 AC015922.1-201ENST00000421102 1152 ntBASIC15.63■□□□□ 0.09
APLFQ8IW19 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.63■□□□□ 0.09
APLFQ8IW19 SPDYE14P-201ENST00000442619 822 ntBASIC15.63■□□□□ 0.09
APLFQ8IW19 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.63■□□□□ 0.09
APLFQ8IW19 LINC02447-202ENST00000501888 2146 ntBASIC15.63■□□□□ 0.09
APLFQ8IW19 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.63■□□□□ 0.09
APLFQ8IW19 MIR3909-201ENST00000579518 119 ntBASIC15.63■□□□□ 0.09
APLFQ8IW19 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.63■□□□□ 0.09
APLFQ8IW19 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 AC063926.2-201ENST00000623766 1308 ntBASIC15.63■□□□□ 0.09
APLFQ8IW19 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.63■□□□□ 0.09
APLFQ8IW19 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
APLFQ8IW19 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms