Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC50Q8IVM0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 MCCD1P2-201ENST00000423228 335 ntBASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 AL139010.1-201ENST00000454878 894 ntBASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 POLD2P1-201ENST00000511220 997 ntBASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 MIR4313-201ENST00000580760 101 ntBASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC50Q8IVM0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms