Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.45■□□□□ 0.7
SMIM5Q71RC9 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 FGFR3P1-201ENST00000449999 601 ntBASIC19.45■□□□□ 0.7
SMIM5Q71RC9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 AL353726.2-201ENST00000623259 884 ntBASIC19.45■□□□□ 0.7
SMIM5Q71RC9 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 AC011477.6-201ENST00000604980 1927 ntBASIC19.45■□□□□ 0.7
SMIM5Q71RC9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.45■□□□□ 0.7
SMIM5Q71RC9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMIM5Q71RC9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 BNIP3P13-201ENST00000599968 566 ntBASIC19.43■□□□□ 0.7
SMIM5Q71RC9 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 ZACNP1-201ENST00000612259 710 ntBASIC19.43■□□□□ 0.7
SMIM5Q71RC9 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.43■□□□□ 0.7
SMIM5Q71RC9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM5Q71RC9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms