Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 AC091812.3-201ENST00000621362 345 ntBASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.21■□□□□ 0.02
LYSMD4Q5XG99 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 KRT8P19-201ENST00000551916 1455 ntBASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 AC016700.1-201ENST00000429424 312 ntBASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 AL133466.1-201ENST00000447582 150 ntBASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 SERPINA13P-202ENST00000478994 924 ntBASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 AC004066.1-201ENST00000502488 802 ntBASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 AC044849.1-201ENST00000519737 1188 ntBASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD4Q5XG99 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 AL645937.2-201ENST00000396808 931 ntBASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 FXNP2-201ENST00000411625 547 ntBASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 CYP46A4P-201ENST00000414953 267 ntBASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD4Q5XG99 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms