Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.33■□□□□ 0.21
TTC39BQ5VTQ0 TMBIM7P-203ENST00000641617 1718 ntBASIC16.33■□□□□ 0.21
TTC39BQ5VTQ0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.33■□□□□ 0.21
TTC39BQ5VTQ0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TTC39BQ5VTQ0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TTC39BQ5VTQ0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
TTC39BQ5VTQ0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TTC39BQ5VTQ0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TTC39BQ5VTQ0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.33■□□□□ 0.21
TTC39BQ5VTQ0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 PIN1P1-201ENST00000412108 996 ntBASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 MEP1AP4-201ENST00000423244 1087 ntBASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 TARDBPP1-201ENST00000442013 1203 ntBASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 AC093004.1-201ENST00000508850 424 ntBASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 DOC2GP-202ENST00000514950 1163 ntBASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 SRD5A3P1-201ENST00000603021 949 ntBASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 AC067930.6-201ENST00000623257 4947 ntBASIC16.33■□□□□ 0.2
TTC39BQ5VTQ0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 AL391825.1-201ENST00000457671 1364 ntBASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 TNRC18P2-201ENST00000417666 2714 ntBASIC16.32■□□□□ 0.2
TTC39BQ5VTQ0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms