Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 AL121723.1-201ENST00000445194 1519 ntBASIC13.69□□□□□ -0.22
FAM27BQ5VT28 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 MEIS3P1-201ENST00000495167 958 ntBASIC13.69□□□□□ -0.22
FAM27BQ5VT28 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 RNA5SP421-201ENST00000516864 134 ntBASIC13.69□□□□□ -0.22
FAM27BQ5VT28 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 NORAD-201ENST00000565493 5339 ntBASIC13.69□□□□□ -0.22
FAM27BQ5VT28 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 AC006058.4-201ENST00000624016 1670 ntBASIC13.69□□□□□ -0.22
FAM27BQ5VT28 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
FAM27BQ5VT28 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AC148477.4-201ENST00000613430 1793 ntBASIC13.68□□□□□ -0.22
FAM27BQ5VT28 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 FAM8A3P-201ENST00000427218 844 ntBASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 CYMP-203ENST00000474680 1263 ntBASIC13.68□□□□□ -0.22
FAM27BQ5VT28 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AC093214.1-201ENST00000511688 1107 ntBASIC13.68□□□□□ -0.22
FAM27BQ5VT28 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AC135586.1-201ENST00000539323 574 ntBASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AC005498.2-205ENST00000593218 784 ntBASIC13.68□□□□□ -0.22
FAM27BQ5VT28 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AC008738.7-201ENST00000609744 511 ntBASIC13.68□□□□□ -0.22
FAM27BQ5VT28 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 AL645728.2-202ENST00000641679 227 ntBASIC13.68□□□□□ -0.22
FAM27BQ5VT28 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM27BQ5VT28 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms