Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 TEX28P1-201ENST00000613479 1221 ntBASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 TEX28P2-201ENST00000617764 1221 ntBASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 AL390754.1-201ENST00000619088 582 ntBASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 BNIP3P1-202ENST00000550043 1585 ntBASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.91■□□□□ 0.14
KHDC1Q4VXA5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 MIR648-201ENST00000385046 94 ntBASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 HMGN1P19-201ENST00000436976 333 ntBASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 HLA-V-204ENST00000476601 1289 ntBASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 AC027369.6-201ENST00000525520 931 ntBASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 AC026979.3-201ENST00000607315 403 ntBASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 CETN4P-206ENST00000642099 2168 ntBASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KHDC1Q4VXA5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms