Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 AC140479.7-201ENST00000636301 2332 ntBASIC14.63□□□□□ -0.07
RFX4Q33E94 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 GPX1P2-201ENST00000429271 606 ntBASIC14.63□□□□□ -0.07
RFX4Q33E94 AC140658.5-201ENST00000438532 169 ntBASIC14.63□□□□□ -0.07
RFX4Q33E94 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 IGHV3-22-201ENST00000520721 359 ntBASIC14.63□□□□□ -0.07
RFX4Q33E94 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.63□□□□□ -0.07
RFX4Q33E94 AC243562.2-201ENST00000561247 970 ntBASIC14.63□□□□□ -0.07
RFX4Q33E94 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.63□□□□□ -0.07
RFX4Q33E94 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RFX4Q33E94 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFX4Q33E94 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.63□□□□□ -0.07
RFX4Q33E94 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 WASH3P-207ENST00000560956 1394 ntBASIC14.62□□□□□ -0.07
RFX4Q33E94 FO538757.1-201ENST00000623083 1397 ntBASIC14.62□□□□□ -0.07
RFX4Q33E94 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.62□□□□□ -0.07
RFX4Q33E94 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 AC002347.1-201ENST00000569543 541 ntBASIC14.62□□□□□ -0.07
RFX4Q33E94 MIR4313-201ENST00000580760 101 ntBASIC14.62□□□□□ -0.07
RFX4Q33E94 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RFX4Q33E94 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.62□□□□□ -0.07
RFX4Q33E94 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.62□□□□□ -0.07
RFX4Q33E94 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFX4Q33E94 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RFX4Q33E94 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RFX4Q33E94 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.61□□□□□ -0.07
RFX4Q33E94 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
RFX4Q33E94 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RFX4Q33E94 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms