Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH17Q12864 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
CDH17Q12864 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH17Q12864 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH17Q12864 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH17Q12864 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH17Q12864 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH17Q12864 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH17Q12864 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH17Q12864 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDH17Q12864 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH17Q12864 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.83■□□□□ 0.13
CDH17Q12864 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDH17Q12864 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
CDH17Q12864 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH17Q12864 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
CDH17Q12864 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH17Q12864 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDH17Q12864 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH17Q12864 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDH17Q12864 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CDH17Q12864 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH17Q12864 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH17Q12864 KLF2P3-201ENST00000451977 1087 ntBASIC15.83■□□□□ 0.12
CDH17Q12864 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH17Q12864 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH17Q12864 AC069120.2-201ENST00000524091 540 ntBASIC15.83■□□□□ 0.12
CDH17Q12864 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH17Q12864 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH17Q12864 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH17Q12864 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH17Q12864 AC073592.8-201ENST00000624126 511 ntBASIC15.83■□□□□ 0.12
CDH17Q12864 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 AP002414.2-201ENST00000591780 3365 ntBASIC15.83■□□□□ 0.12
CDH17Q12864 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CDH17Q12864 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH17Q12864 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH17Q12864 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDH17Q12864 TNRC18P2-201ENST00000417666 2714 ntBASIC15.82■□□□□ 0.12
CDH17Q12864 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH17Q12864 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CDH17Q12864 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH17Q12864 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDH17Q12864 AC023024.2-201ENST00000623561 1993 ntBASIC15.82■□□□□ 0.12
CDH17Q12864 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDH17Q12864 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH17Q12864 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH17Q12864 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH17Q12864 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH17Q12864 RN7SL618P-201ENST00000477850 296 ntBASIC15.82■□□□□ 0.12
CDH17Q12864 AC067863.1-201ENST00000494933 530 ntBASIC15.82■□□□□ 0.12
CDH17Q12864 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH17Q12864 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH17Q12864 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH17Q12864 AC140878.1-201ENST00000565277 250 ntBASIC15.82■□□□□ 0.12
CDH17Q12864 AC051619.7-201ENST00000568314 623 ntBASIC15.82■□□□□ 0.12
CDH17Q12864 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH17Q12864 AP001160.2-201ENST00000596071 487 ntBASIC15.82■□□□□ 0.12
CDH17Q12864 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH17Q12864 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CDH17Q12864 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CDH17Q12864 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH17Q12864 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CDH17Q12864 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CDH17Q12864 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH17Q12864 TCAF2P1-201ENST00000291129 2421 ntBASIC15.82■□□□□ 0.12
CDH17Q12864 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH17Q12864 AC091951.1-201ENST00000512854 2465 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms