Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.62□□□□□ -0.07
CD47Q08722 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 WASH6P-202ENST00000359512 1437 ntBASIC14.62□□□□□ -0.07
CD47Q08722 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CD47Q08722 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.62□□□□□ -0.07
CD47Q08722 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 AC140658.5-201ENST00000438532 169 ntBASIC14.62□□□□□ -0.07
CD47Q08722 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.62□□□□□ -0.07
CD47Q08722 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.62□□□□□ -0.07
CD47Q08722 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.62□□□□□ -0.07
CD47Q08722 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 SLC25A1P1-201ENST00000528351 927 ntBASIC14.62□□□□□ -0.07
CD47Q08722 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.62□□□□□ -0.07
CD47Q08722 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CD47Q08722 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 BX640515.1-201ENST00000617215 977 ntBASIC14.62□□□□□ -0.07
CD47Q08722 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.62□□□□□ -0.07
CD47Q08722 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CD47Q08722 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.61□□□□□ -0.07
CD47Q08722 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.61□□□□□ -0.07
CD47Q08722 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CD47Q08722 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.61□□□□□ -0.07
CD47Q08722 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.61□□□□□ -0.07
CD47Q08722 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CD47Q08722 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.61□□□□□ -0.07
CD47Q08722 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CD47Q08722 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CD47Q08722 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.61□□□□□ -0.07
CD47Q08722 AL591424.1-201ENST00000442569 1213 ntBASIC14.61□□□□□ -0.07
CD47Q08722 KRT18P2-201ENST00000447938 1258 ntBASIC14.61□□□□□ -0.07
CD47Q08722 AC093724.1-201ENST00000448659 1027 ntBASIC14.61□□□□□ -0.07
CD47Q08722 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.61□□□□□ -0.07
CD47Q08722 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.61□□□□□ -0.07
CD47Q08722 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.61□□□□□ -0.07
CD47Q08722 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.61□□□□□ -0.07
CD47Q08722 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CD47Q08722 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.61□□□□□ -0.07
CD47Q08722 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CD47Q08722 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.61□□□□□ -0.07
CD47Q08722 AC068137.2-201ENST00000605408 478 ntBASIC14.61□□□□□ -0.07
CD47Q08722 AL078644.1-201ENST00000609881 752 ntBASIC14.61□□□□□ -0.07
CD47Q08722 AC027601.4-201ENST00000611259 610 ntBASIC14.61□□□□□ -0.07
CD47Q08722 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.61□□□□□ -0.07
CD47Q08722 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.61□□□□□ -0.07
CD47Q08722 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD47Q08722 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CD47Q08722 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.61□□□□□ -0.07
CD47Q08722 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CD47Q08722 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms