Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 SLC25A1P1-201ENST00000528351 927 ntBASIC12.08□□□□□ -0.48
HIST1H1AQ02539 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 RARRES2P8-201ENST00000566335 367 ntBASIC12.08□□□□□ -0.48
HIST1H1AQ02539 AP002472.1-201ENST00000577490 586 ntBASIC12.08□□□□□ -0.48
HIST1H1AQ02539 MIR4321-201ENST00000592276 80 ntBASIC12.08□□□□□ -0.48
HIST1H1AQ02539 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H1AQ02539 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.07□□□□□ -0.48
HIST1H1AQ02539 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 AC106881.1-201ENST00000605849 3329 ntBASIC12.07□□□□□ -0.48
HIST1H1AQ02539 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 AC026396.1-201ENST00000419388 421 ntBASIC12.07□□□□□ -0.48
HIST1H1AQ02539 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.07□□□□□ -0.48
HIST1H1AQ02539 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 AC087481.3-201ENST00000602886 1894 ntBASIC12.07□□□□□ -0.48
HIST1H1AQ02539 BX640515.1-201ENST00000617215 977 ntBASIC12.07□□□□□ -0.48
HIST1H1AQ02539 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 AC092865.6-201ENST00000642101 219 ntBASIC12.07□□□□□ -0.48
HIST1H1AQ02539 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 AP001282.1-201ENST00000531301 1499 ntBASIC12.07□□□□□ -0.48
HIST1H1AQ02539 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 CICP24-201ENST00000605464 2705 ntBASIC12.07□□□□□ -0.48
HIST1H1AQ02539 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HIST1H1AQ02539 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms