Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TMBIM7P-203ENST00000641617 1718 ntBASIC14.01□□□□□ -0.17
H3F3AP84243 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.01□□□□□ -0.17
H3F3AP84243 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3AP84243 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3AP84243 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14□□□□□ -0.17
H3F3AP84243 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14□□□□□ -0.17
H3F3AP84243 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14□□□□□ -0.17
H3F3AP84243 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H3F3AP84243 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14□□□□□ -0.17
H3F3AP84243 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
H3F3AP84243 MIR661-201ENST00000384842 89 ntBASIC14□□□□□ -0.17
H3F3AP84243 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H3F3AP84243 DOC2GP-202ENST00000514950 1163 ntBASIC14□□□□□ -0.17
H3F3AP84243 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14□□□□□ -0.17
H3F3AP84243 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14□□□□□ -0.17
H3F3AP84243 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14□□□□□ -0.17
H3F3AP84243 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
H3F3AP84243 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14□□□□□ -0.17
H3F3AP84243 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
H3F3AP84243 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H3F3AP84243 AC000095.1-201ENST00000603208 874 ntBASIC14□□□□□ -0.17
H3F3AP84243 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14□□□□□ -0.17
H3F3AP84243 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14□□□□□ -0.17
H3F3AP84243 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14□□□□□ -0.17
H3F3AP84243 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H3F3AP84243 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14□□□□□ -0.17
H3F3AP84243 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14□□□□□ -0.17
H3F3AP84243 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
H3F3AP84243 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14□□□□□ -0.17
H3F3AP84243 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 AL121723.1-201ENST00000445194 1519 ntBASIC14□□□□□ -0.17
H3F3AP84243 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
H3F3AP84243 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3F3AP84243 AC136621.1-201ENST00000624017 2304 ntBASIC13.99□□□□□ -0.17
H3F3AP84243 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.99□□□□□ -0.17
H3F3AP84243 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 AC022532.1-201ENST00000624563 1728 ntBASIC13.99□□□□□ -0.17
H3F3AP84243 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.99□□□□□ -0.17
H3F3AP84243 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.99□□□□□ -0.17
H3F3AP84243 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
H3F3AP84243 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.99□□□□□ -0.17
H3F3AP84243 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.99□□□□□ -0.17
H3F3AP84243 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 MEP1AP4-201ENST00000423244 1087 ntBASIC13.99□□□□□ -0.17
H3F3AP84243 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.99□□□□□ -0.17
H3F3AP84243 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.99□□□□□ -0.17
H3F3AP84243 KRT18P43-201ENST00000469825 1281 ntBASIC13.99□□□□□ -0.17
H3F3AP84243 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 SERBP1P5-201ENST00000510079 1181 ntBASIC13.99□□□□□ -0.17
H3F3AP84243 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.99□□□□□ -0.17
H3F3AP84243 RARRES2P5-201ENST00000564013 466 ntBASIC13.99□□□□□ -0.17
H3F3AP84243 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.99□□□□□ -0.17
H3F3AP84243 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
H3F3AP84243 RN7SL204P-201ENST00000582831 262 ntBASIC13.99□□□□□ -0.17
H3F3AP84243 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 AL158212.4-201ENST00000624062 1286 ntBASIC13.99□□□□□ -0.17
H3F3AP84243 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.99□□□□□ -0.17
H3F3AP84243 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
H3F3AP84243 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3F3AP84243 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms