Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.82□□□□□ -0.04
RAE1P78406 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAE1P78406 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RAE1P78406 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.82□□□□□ -0.04
RAE1P78406 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.82□□□□□ -0.04
RAE1P78406 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.82□□□□□ -0.04
RAE1P78406 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.82□□□□□ -0.04
RAE1P78406 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.82□□□□□ -0.04
RAE1P78406 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.82□□□□□ -0.04
RAE1P78406 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.82□□□□□ -0.04
RAE1P78406 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.82□□□□□ -0.04
RAE1P78406 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
RAE1P78406 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.82□□□□□ -0.04
RAE1P78406 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
RAE1P78406 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 AL590560.3-201ENST00000623350 461 ntBASIC14.82□□□□□ -0.04
RAE1P78406 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.82□□□□□ -0.04
RAE1P78406 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.82□□□□□ -0.04
RAE1P78406 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAE1P78406 AL121723.1-201ENST00000445194 1519 ntBASIC14.82□□□□□ -0.04
RAE1P78406 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RAE1P78406 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
RAE1P78406 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.81□□□□□ -0.04
RAE1P78406 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RAE1P78406 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RAE1P78406 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.81□□□□□ -0.04
RAE1P78406 TSSK5P-201ENST00000423978 907 ntBASIC14.81□□□□□ -0.04
RAE1P78406 GHSR-202ENST00000427970 912 ntBASIC14.81□□□□□ -0.04
RAE1P78406 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RAE1P78406 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 AC067863.1-201ENST00000494933 530 ntBASIC14.81□□□□□ -0.04
RAE1P78406 ZNF890P-202ENST00000530367 1156 ntBASIC14.81□□□□□ -0.04
RAE1P78406 DUX4L27-201ENST00000554796 1261 ntBASIC14.81□□□□□ -0.04
RAE1P78406 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.81□□□□□ -0.04
RAE1P78406 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAE1P78406 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.81□□□□□ -0.04
RAE1P78406 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms