Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PRAMEP78395 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEP78395 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEP78395 CETN4P-206ENST00000642099 2168 ntBASIC15.86■□□□□ 0.13
PRAMEP78395 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEP78395 KRT8P12-202ENST00000472924 1397 ntBASIC15.86■□□□□ 0.13
PRAMEP78395 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PRAMEP78395 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PRAMEP78395 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEP78395 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PRAMEP78395 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PRAMEP78395 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PRAMEP78395 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.86■□□□□ 0.13
PRAMEP78395 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.85■□□□□ 0.13
PRAMEP78395 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PRAMEP78395 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 AC127383.1-201ENST00000444697 1800 ntBASIC15.85■□□□□ 0.13
PRAMEP78395 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PRAMEP78395 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.85■□□□□ 0.13
PRAMEP78395 AC013268.4-201ENST00000637413 2228 ntBASIC15.85■□□□□ 0.13
PRAMEP78395 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
PRAMEP78395 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PRAMEP78395 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.85■□□□□ 0.13
PRAMEP78395 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.85■□□□□ 0.13
PRAMEP78395 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.85■□□□□ 0.13
PRAMEP78395 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.85■□□□□ 0.13
PRAMEP78395 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.85■□□□□ 0.13
PRAMEP78395 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PRAMEP78395 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.85■□□□□ 0.13
PRAMEP78395 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRAMEP78395 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PRAMEP78395 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.84■□□□□ 0.13
PRAMEP78395 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRAMEP78395 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRAMEP78395 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRAMEP78395 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 CNN2P2-201ENST00000443536 909 ntBASIC15.84■□□□□ 0.13
PRAMEP78395 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 CNN2P3-201ENST00000450201 906 ntBASIC15.84■□□□□ 0.13
PRAMEP78395 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.84■□□□□ 0.13
PRAMEP78395 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.84■□□□□ 0.13
PRAMEP78395 AL079307.3-201ENST00000556114 283 ntBASIC15.84■□□□□ 0.13
PRAMEP78395 AC004449.1-201ENST00000564240 433 ntBASIC15.84■□□□□ 0.13
PRAMEP78395 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.84■□□□□ 0.13
PRAMEP78395 AC097359.3-201ENST00000603982 1210 ntBASIC15.84■□□□□ 0.13
PRAMEP78395 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 AL136317.3-201ENST00000618497 906 ntBASIC15.84■□□□□ 0.13
PRAMEP78395 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.84■□□□□ 0.13
PRAMEP78395 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEP78395 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.84■□□□□ 0.13
PRAMEP78395 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.84■□□□□ 0.13
PRAMEP78395 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms