Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.27■□□□□ 0.04
YBX1P67809 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.27■□□□□ 0.04
YBX1P67809 AL096865.1-201ENST00000606796 927 ntBASIC15.27■□□□□ 0.04
YBX1P67809 AC004461.2-201ENST00000629517 803 ntBASIC15.27■□□□□ 0.04
YBX1P67809 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.27■□□□□ 0.03
YBX1P67809 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.27■□□□□ 0.03
YBX1P67809 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YBX1P67809 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
YBX1P67809 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
YBX1P67809 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YBX1P67809 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
YBX1P67809 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
YBX1P67809 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.27■□□□□ 0.03
YBX1P67809 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YBX1P67809 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YBX1P67809 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
YBX1P67809 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YBX1P67809 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.27■□□□□ 0.03
YBX1P67809 LINC00528-201ENST00000600723 2160 ntBASIC15.26■□□□□ 0.03
YBX1P67809 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
YBX1P67809 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.26■□□□□ 0.03
YBX1P67809 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.26■□□□□ 0.03
YBX1P67809 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.26■□□□□ 0.03
YBX1P67809 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
YBX1P67809 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
YBX1P67809 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.26■□□□□ 0.03
YBX1P67809 AC026748.1-201ENST00000624349 3251 ntBASIC15.26■□□□□ 0.03
YBX1P67809 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.26■□□□□ 0.03
YBX1P67809 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.26■□□□□ 0.03
YBX1P67809 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.26■□□□□ 0.03
YBX1P67809 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.26■□□□□ 0.03
YBX1P67809 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 RNA5SP421-201ENST00000516864 134 ntBASIC15.26■□□□□ 0.03
YBX1P67809 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.26■□□□□ 0.03
YBX1P67809 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.26■□□□□ 0.03
YBX1P67809 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.26■□□□□ 0.03
YBX1P67809 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
YBX1P67809 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
YBX1P67809 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.26■□□□□ 0.03
YBX1P67809 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
YBX1P67809 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.26■□□□□ 0.03
YBX1P67809 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YBX1P67809 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.25■□□□□ 0.03
YBX1P67809 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.25■□□□□ 0.03
YBX1P67809 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
YBX1P67809 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.25■□□□□ 0.03
YBX1P67809 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.25■□□□□ 0.03
YBX1P67809 Z97205.2-201ENST00000564697 1639 ntBASIC15.25■□□□□ 0.03
YBX1P67809 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.25■□□□□ 0.03
YBX1P67809 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.25■□□□□ 0.03
YBX1P67809 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.25■□□□□ 0.03
YBX1P67809 TSPY16P-201ENST00000449843 468 ntBASIC15.25■□□□□ 0.03
YBX1P67809 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.25■□□□□ 0.03
YBX1P67809 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.25■□□□□ 0.03
YBX1P67809 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.25■□□□□ 0.03
YBX1P67809 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.25■□□□□ 0.03
YBX1P67809 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
YBX1P67809 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
YBX1P67809 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.25■□□□□ 0.03
YBX1P67809 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.25■□□□□ 0.03
YBX1P67809 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
YBX1P67809 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.25■□□□□ 0.03
YBX1P67809 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
YBX1P67809 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
YBX1P67809 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms