Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRPFP62306 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.94■□□□□ 0.3
SNRPFP62306 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.94■□□□□ 0.3
SNRPFP62306 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.94■□□□□ 0.3
SNRPFP62306 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRPFP62306 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRPFP62306 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRPFP62306 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRPFP62306 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SNRPFP62306 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.93■□□□□ 0.3
SNRPFP62306 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SNRPFP62306 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.93■□□□□ 0.3
SNRPFP62306 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.93■□□□□ 0.3
SNRPFP62306 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.93■□□□□ 0.3
SNRPFP62306 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SNRPFP62306 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SNRPFP62306 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 AC104596.2-201ENST00000512793 793 ntBASIC16.93■□□□□ 0.3
SNRPFP62306 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.93■□□□□ 0.3
SNRPFP62306 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.93■□□□□ 0.3
SNRPFP62306 AC004233.3-201ENST00000607794 1269 ntBASIC16.93■□□□□ 0.3
SNRPFP62306 AL662799.1-202ENST00000614205 422 ntBASIC16.93■□□□□ 0.3
SNRPFP62306 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.93■□□□□ 0.3
SNRPFP62306 DRD5P1-201ENST00000456605 1438 ntBASIC16.93■□□□□ 0.3
SNRPFP62306 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.93■□□□□ 0.3
SNRPFP62306 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.93■□□□□ 0.3
SNRPFP62306 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SNRPFP62306 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRPFP62306 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.93■□□□□ 0.3
SNRPFP62306 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.92■□□□□ 0.3
SNRPFP62306 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SNRPFP62306 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 AC023024.2-201ENST00000623561 1993 ntBASIC16.92■□□□□ 0.3
SNRPFP62306 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SNRPFP62306 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.92■□□□□ 0.3
SNRPFP62306 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SNRPFP62306 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.92■□□□□ 0.3
SNRPFP62306 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRPFP62306 AL442647.2-201ENST00000429864 857 ntBASIC16.92■□□□□ 0.3
SNRPFP62306 AC002472.2-201ENST00000442739 958 ntBASIC16.92■□□□□ 0.3
SNRPFP62306 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SNRPFP62306 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRPFP62306 AC004066.1-201ENST00000502488 802 ntBASIC16.92■□□□□ 0.3
SNRPFP62306 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.92■□□□□ 0.3
SNRPFP62306 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.92■□□□□ 0.3
SNRPFP62306 TMEM261P1-201ENST00000604899 340 ntBASIC16.92■□□□□ 0.3
SNRPFP62306 AC093813.1-201ENST00000605066 256 ntBASIC16.92■□□□□ 0.3
SNRPFP62306 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.92■□□□□ 0.3
SNRPFP62306 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRPFP62306 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SNRPFP62306 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SNRPFP62306 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRPFP62306 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRPFP62306 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.91■□□□□ 0.3
SNRPFP62306 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNRPFP62306 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.91■□□□□ 0.3
SNRPFP62306 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SNRPFP62306 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms