Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VBP1P61758 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.1□□□□□ -0.15
VBP1P61758 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VBP1P61758 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.1□□□□□ -0.15
VBP1P61758 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.1□□□□□ -0.15
VBP1P61758 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.1□□□□□ -0.15
VBP1P61758 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VBP1P61758 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 RNF152P1-201ENST00000397754 604 ntBASIC14.1□□□□□ -0.15
VBP1P61758 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
VBP1P61758 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VBP1P61758 AL645939.2-201ENST00000427340 991 ntBASIC14.1□□□□□ -0.15
VBP1P61758 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.1□□□□□ -0.15
VBP1P61758 AC093724.1-201ENST00000448659 1027 ntBASIC14.1□□□□□ -0.15
VBP1P61758 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.1□□□□□ -0.15
VBP1P61758 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.1□□□□□ -0.15
VBP1P61758 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VBP1P61758 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
VBP1P61758 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 TCAF1P1-201ENST00000414990 2232 ntBASIC14.1□□□□□ -0.15
VBP1P61758 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.1□□□□□ -0.15
VBP1P61758 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VBP1P61758 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.09□□□□□ -0.15
VBP1P61758 AC152010.1-201ENST00000415779 2006 ntBASIC14.09□□□□□ -0.15
VBP1P61758 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VBP1P61758 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
VBP1P61758 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.09□□□□□ -0.15
VBP1P61758 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 MIR935-201ENST00000401179 91 ntBASIC14.09□□□□□ -0.15
VBP1P61758 PTCHD3P3-201ENST00000403073 906 ntBASIC14.09□□□□□ -0.15
VBP1P61758 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.09□□□□□ -0.15
VBP1P61758 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.09□□□□□ -0.15
VBP1P61758 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.09□□□□□ -0.15
VBP1P61758 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.09□□□□□ -0.15
VBP1P61758 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.09□□□□□ -0.15
VBP1P61758 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.09□□□□□ -0.15
VBP1P61758 AC114341.1-201ENST00000618070 349 ntBASIC14.09□□□□□ -0.15
VBP1P61758 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms