Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.82□□□□□ -0.2
SEC61A1P61619 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEC61A1P61619 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.82□□□□□ -0.2
SEC61A1P61619 AP003680.1-201ENST00000598970 3660 ntBASIC13.82□□□□□ -0.2
SEC61A1P61619 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.81□□□□□ -0.2
SEC61A1P61619 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.81□□□□□ -0.2
SEC61A1P61619 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
SEC61A1P61619 UXT-AS1-201ENST00000590504 1525 ntBASIC13.81□□□□□ -0.2
SEC61A1P61619 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SEC61A1P61619 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.81□□□□□ -0.2
SEC61A1P61619 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 IGHV3-62-201ENST00000520057 340 ntBASIC13.81□□□□□ -0.2
SEC61A1P61619 AL355385.1-201ENST00000606123 409 ntBASIC13.81□□□□□ -0.2
SEC61A1P61619 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.81□□□□□ -0.2
SEC61A1P61619 LINC00628-201ENST00000628516 1289 ntBASIC13.81□□□□□ -0.2
SEC61A1P61619 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SEC61A1P61619 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.81□□□□□ -0.2
SEC61A1P61619 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.81□□□□□ -0.2
SEC61A1P61619 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.81□□□□□ -0.2
SEC61A1P61619 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.81□□□□□ -0.2
SEC61A1P61619 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SEC61A1P61619 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEC61A1P61619 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC61A1P61619 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC61A1P61619 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC61A1P61619 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
SEC61A1P61619 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SEC61A1P61619 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.8□□□□□ -0.2
SEC61A1P61619 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.8□□□□□ -0.2
SEC61A1P61619 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SEC61A1P61619 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC61A1P61619 MIR648-201ENST00000385046 94 ntBASIC13.8□□□□□ -0.2
SEC61A1P61619 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SEC61A1P61619 AL645939.2-201ENST00000427340 991 ntBASIC13.8□□□□□ -0.2
SEC61A1P61619 CYMP-203ENST00000474680 1263 ntBASIC13.8□□□□□ -0.2
SEC61A1P61619 HLA-J-203ENST00000494367 1087 ntBASIC13.8□□□□□ -0.2
SEC61A1P61619 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.8□□□□□ -0.2
SEC61A1P61619 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SEC61A1P61619 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC61A1P61619 LINC01225-203ENST00000563550 1244 ntBASIC13.8□□□□□ -0.2
SEC61A1P61619 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC61A1P61619 AL138918.1-201ENST00000568306 659 ntBASIC13.8□□□□□ -0.2
SEC61A1P61619 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC61A1P61619 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC61A1P61619 AC021097.1-201ENST00000607902 574 ntBASIC13.8□□□□□ -0.2
SEC61A1P61619 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC61A1P61619 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC61A1P61619 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 AC069224.1-201ENST00000566372 1715 ntBASIC13.8□□□□□ -0.2
SEC61A1P61619 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC61A1P61619 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.8□□□□□ -0.2
SEC61A1P61619 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms