Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RPS3AP61247 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RPS3AP61247 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.79□□□□□ -0.04
RPS3AP61247 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RPS3AP61247 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.79□□□□□ -0.04
RPS3AP61247 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RPS3AP61247 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.79□□□□□ -0.04
RPS3AP61247 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.79□□□□□ -0.04
RPS3AP61247 HLA-J-203ENST00000494367 1087 ntBASIC14.79□□□□□ -0.04
RPS3AP61247 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.79□□□□□ -0.04
RPS3AP61247 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RPS3AP61247 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.79□□□□□ -0.04
RPS3AP61247 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.79□□□□□ -0.04
RPS3AP61247 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.79□□□□□ -0.04
RPS3AP61247 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.79□□□□□ -0.04
RPS3AP61247 AC073389.1-201ENST00000595595 795 ntBASIC14.79□□□□□ -0.04
RPS3AP61247 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
RPS3AP61247 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RPS3AP61247 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 CICP23-201ENST00000605013 2741 ntBASIC14.79□□□□□ -0.04
RPS3AP61247 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RPS3AP61247 REXO1L2P-201ENST00000425429 2069 ntBASIC14.78□□□□□ -0.04
RPS3AP61247 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPS3AP61247 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.78□□□□□ -0.04
RPS3AP61247 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.78□□□□□ -0.04
RPS3AP61247 AC069224.1-201ENST00000566372 1715 ntBASIC14.78□□□□□ -0.04
RPS3AP61247 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.78□□□□□ -0.04
RPS3AP61247 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.78□□□□□ -0.04
RPS3AP61247 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.78□□□□□ -0.04
RPS3AP61247 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.78□□□□□ -0.04
RPS3AP61247 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.78□□□□□ -0.04
RPS3AP61247 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RPS3AP61247 SPDYE7P-202ENST00000420373 878 ntBASIC14.78□□□□□ -0.04
RPS3AP61247 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.78□□□□□ -0.04
RPS3AP61247 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.78□□□□□ -0.04
RPS3AP61247 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.78□□□□□ -0.04
RPS3AP61247 RBPMS2P1-201ENST00000437762 623 ntBASIC14.78□□□□□ -0.04
RPS3AP61247 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.78□□□□□ -0.04
RPS3AP61247 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.78□□□□□ -0.04
RPS3AP61247 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPS3AP61247 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RPS3AP61247 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.78□□□□□ -0.04
RPS3AP61247 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.78□□□□□ -0.04
RPS3AP61247 AC084121.4-201ENST00000641598 221 ntBASIC14.78□□□□□ -0.04
RPS3AP61247 AF228730.8-201ENST00000642140 221 ntBASIC14.78□□□□□ -0.04
RPS3AP61247 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.78□□□□□ -0.04
RPS3AP61247 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.78□□□□□ -0.04
RPS3AP61247 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RPS3AP61247 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.78□□□□□ -0.04
RPS3AP61247 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 PCGF3-213ENST00000620529 1899 ntBASIC14.78□□□□□ -0.04
RPS3AP61247 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RPS3AP61247 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RPS3AP61247 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RPS3AP61247 AC073439.1-201ENST00000624121 1774 ntBASIC14.78□□□□□ -0.04
RPS3AP61247 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPS3AP61247 LINC01144-201ENST00000626198 1710 ntBASIC14.78□□□□□ -0.04
RPS3AP61247 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS3AP61247 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS3AP61247 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS3AP61247 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS3AP61247 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS3AP61247 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RPS3AP61247 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS3AP61247 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
RPS3AP61247 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RPS3AP61247 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS3AP61247 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPS3AP61247 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
RPS3AP61247 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RPS3AP61247 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPS3AP61247 MIR346-201ENST00000362234 95 ntBASIC14.77□□□□□ -0.05
RPS3AP61247 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RPS3AP61247 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPS3AP61247 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.77□□□□□ -0.05
RPS3AP61247 SLC25A39P2-201ENST00000537614 270 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms