Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN20P56880 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN20P56880 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.41□□□□□ -0.1
CLDN20P56880 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.41□□□□□ -0.1
CLDN20P56880 AC009477.1-201ENST00000452936 217 ntBASIC14.41□□□□□ -0.1
CLDN20P56880 SERBP1P3-201ENST00000459980 809 ntBASIC14.41□□□□□ -0.1
CLDN20P56880 RN7SL618P-201ENST00000477850 296 ntBASIC14.41□□□□□ -0.1
CLDN20P56880 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN20P56880 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN20P56880 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 AC010336.2-201ENST00000564226 506 ntBASIC14.41□□□□□ -0.1
CLDN20P56880 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.41□□□□□ -0.1
CLDN20P56880 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
CLDN20P56880 AL033527.5-202ENST00000641632 1098 ntBASIC14.41□□□□□ -0.1
CLDN20P56880 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CLDN20P56880 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLDN20P56880 AP001282.1-201ENST00000531301 1499 ntBASIC14.41□□□□□ -0.1
CLDN20P56880 AC022144.1-201ENST00000602255 1580 ntBASIC14.41□□□□□ -0.1
CLDN20P56880 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.41□□□□□ -0.1
CLDN20P56880 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN20P56880 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN20P56880 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN20P56880 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN20P56880 SSR4P1-203ENST00000599569 2260 ntBASIC14.4□□□□□ -0.1
CLDN20P56880 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN20P56880 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CLDN20P56880 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CLDN20P56880 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CLDN20P56880 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN20P56880 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN20P56880 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN20P56880 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN20P56880 TSPY16P-201ENST00000449843 468 ntBASIC14.4□□□□□ -0.1
CLDN20P56880 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN20P56880 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN20P56880 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN20P56880 AC009407.1-201ENST00000568958 598 ntBASIC14.4□□□□□ -0.1
CLDN20P56880 MIR4745-201ENST00000577608 62 ntBASIC14.4□□□□□ -0.1
CLDN20P56880 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.4□□□□□ -0.1
CLDN20P56880 AC092364.2-202ENST00000597012 1073 ntBASIC14.4□□□□□ -0.1
CLDN20P56880 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDN20P56880 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 CDC14C-201ENST00000428251 1719 ntBASIC14.4□□□□□ -0.1
CLDN20P56880 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN20P56880 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDN20P56880 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CLDN20P56880 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLDN20P56880 KRT8P37-201ENST00000451609 1420 ntBASIC14.4□□□□□ -0.1
CLDN20P56880 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDN20P56880 AC106881.1-201ENST00000605849 3329 ntBASIC14.4□□□□□ -0.11
CLDN20P56880 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 NFIC-211ENST00000641145 8399 ntBASIC14.39□□□□□ -0.11
CLDN20P56880 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLDN20P56880 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN20P56880 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms