Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 IFNL4P1-201ENST00000607083 540 ntBASIC13.69□□□□□ -0.22
CLDN12P56749 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CLDN12P56749 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 GRK6P1-201ENST00000400595 1711 ntBASIC13.69□□□□□ -0.22
CLDN12P56749 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLDN12P56749 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN12P56749 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN12P56749 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN12P56749 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN12P56749 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDN12P56749 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 ZBED1P1-201ENST00000502364 1930 ntBASIC13.68□□□□□ -0.22
CLDN12P56749 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN12P56749 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
CLDN12P56749 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLDN12P56749 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
CLDN12P56749 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN12P56749 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN12P56749 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN12P56749 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLDN12P56749 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.68□□□□□ -0.22
CLDN12P56749 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN12P56749 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN12P56749 VN2R19P-201ENST00000442399 1052 ntBASIC13.68□□□□□ -0.22
CLDN12P56749 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN12P56749 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.68□□□□□ -0.22
CLDN12P56749 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN12P56749 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN12P56749 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN12P56749 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN12P56749 AC012313.10-201ENST00000623509 926 ntBASIC13.68□□□□□ -0.22
CLDN12P56749 AC148477.8-201ENST00000624298 468 ntBASIC13.68□□□□□ -0.22
CLDN12P56749 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN12P56749 AC010507.1-201ENST00000633895 436 ntBASIC13.68□□□□□ -0.22
CLDN12P56749 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN12P56749 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN12P56749 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN12P56749 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN12P56749 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN12P56749 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN12P56749 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CLDN12P56749 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.67□□□□□ -0.22
CLDN12P56749 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.67□□□□□ -0.22
CLDN12P56749 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms